Cytomer Ontology Browser
Cytomer is an ontology describing the human anatomy and development and comprises morphological structures from the cell level up to parts of the body. Structures are linked to Carnegie stages and under each other with various relations.

The Cytomer ontology can be differently used, depending on the intended use. The tree below displays the class hierarchy of the ontology and gives detailed information of the selected ontology class.
OntoScope is a full featured graphical viewer enabling the user to browse Cytomer as a graph. A Java web start version of OntoScope can be launched here.

The OBA service enables access to Cytomer in a programmatic way for integration into other projects. The oba service extends Cytomer with semantic functions. More information is available on the homepage of the oba project. http://www.bioinf.med.uni-goettingen.de/projects/oba

You can download the ontology in OWL-format here.

ontology tree
  • Thing
    • anatomical_entity
      • anatomical_building_block
        • part_of_blood_vessel
        • tendon
        • joint
        • first_polar_body
        • anatomical_measure
        • part_of_human_body
        • beard
        • muscle
        • tendon_sheath
        • part_of_fascia
        • nerve_system_element
        • bone
        • group_of_muscles
        • part_of_ligament
        • part_of_bone
        • space
        • organ
        • cartilage
        • physical_liquid
        • part_of_joint
        • ROOT
        • extraembryonic_component
        • tissue
        • ligament
        • cell
        • fascia
        • tooth
        • zygote
        • bursa_of_muscular_system
        • part_of_muscle
        • blood_vessel
        • part_of_tendon_sheath
        • membrane
        • embryonic_structure
        • part_of_membrane
        • part_of_nerve_system_element
        • part_of_lymphatic_vessel
        • lymphatic_vessel
        • junction_element
        • part_of_organ
          • part_of_brain
            • longitudinal_cerebral_fissure
            • pars_distalis_of_adenohypophysis
            • future_superior_colliculi
            • central_lobule_of_cerebellum_II_and_III
            • zones_of_hypothalamus
            • limbic_system
            • long_gyrus_of_insula
            • superior_cerebellar_peduncle_of_midbrain
            • anterior_hypothalamic_area
            • tectum_of_mesencephalon
            • temporal_plane_of_temporal_lobe
            • medulla_oblongata
            • posterior_spinocerebellar_tract_of_medulla_oblongata
            • rostral_part_of_gracile_nucleus
            • anterior_part_of_culmen_IV
            • frontal_pole
            • facial_colliculus
            • medial_and_inferior_surfaces_of_cerebral_hemisphere
            • marginal_layer_of_cerebellum
            • D1_optic
            • interthalamic_adhesion_of_hypothalamus
            • tegmentum_of_midbrain_of_cerebral_peduncle
            • telencephalic_part_of_interventricular_foramen
            • olfactory_peduncle
            • precuneus
            • inferior_fovea
            • extradural_space_of_cranial_dura_mater
            • parvocellular_part_of_red_nucleus
            • locus_caeruleus
            • epithalamus
            • lunogracile_fissure
            • parietal_operculum
            • pia_mater_of_meninges_of_rhombencephalon
            • pontocerebellum
            • intermediate_layer_of_telencephalon
            • fimbria_of_hippocampus
            • lateral_lemniscus_of_midbrain
            • allocortex
            • vermis_of_cerebellum_I_-_X
            • lingula_of_cerebellum_I
            • future_metencephalon
            • restiform_body_of_medulla
            • commissure
            • infundibulum_of_pituitary_gland
            • anterior_quadrangular_lobule_of_cerebellum_H_IV_and_H_V
            • future_olfactory_bulb
            • alar_plate_of_myelencephalon
            • marginal_layer_of_metencephalon
            • inferior_olive
            • ventricular_layer_of_myelencephalon
            • medial_zone_of_hypothalamus
            • funiculus_separans
            • sublentiform_limb_of_internal_capsule
            • biventral_lobule_H_VIII
            • ventral_supra-optic_commissure
            • intermediate_layer_of_telencephalon_medium
            • Purkinje_cell_layer_of_cerebellar_cortex
            • inferior_colliculus
            • posterior_limb_of_internal_capsule
            • dorsal_supra-optic_commissure
            • densocellular_part_of_medial_dorsal_nucleus_of_thalamus
            • hypothalamic_sulcus
            • pretectal_area
            • medial_part_of_globus_pallidus
            • pars_tuberalis_of_adenohypophysis
            • choroidal_enlargement_of_pia_mater
            • internal_pyramidal_layer_of_isocortex
            • lateral_part_of_globus_pallidus
            • medullary_striae_of_fourth_ventricle_of_white_substance
            • globus_pallidus_medial_segment
            • molecular_layer_of_dentate_gyrus
            • future_amygdala_of_diencephalon
            • lateral_cerebellomedullary_cistern
            • marginal_branch_of_parietal_lobe
            • anterior_part_of_anterior_quadrangular_lobule_of_cerebellum_H_IV
            • anterior_crus_of_fornix
            • parvocellular_part_of_lateral_reticular_nucleus
            • choroid_plexus_of_fourth_ventricle
            • reticular_formation_of_central_nervous_system
            • cerebral_fossa
            • vagal_trunk
            • pia_mater_of_meninges_of_mesencephalon
            • interpolar_part_of_spinal_nucleus_of_trigeminal_nerve
            • region_IV_of_hippocampus_proper
            • anterior_commissure_of_commissural_fibres_of_telencephalon
            • posterior_thalamic_radiation
            • amygdaloclaustral_area
            • raphe_of_medulla_oblongata
            • parieto-occipital_sulcus_of_parietal_lobe
            • epithelial_lamina_of_telencephalon
            • ventral_posterior_complex_of_thalamus
            • prosencephalon
            • oriens_layer_of_hippocampus
            • anterior_commissure_of_diencephalon
            • tela_choroidea_of_fourth_ventricle_of_pia_mater
            • pachymeninx_of_diencephalon
            • isthmus_of_cingulate_gyrus
            • paleocortex
            • pyramidal_tract_of_midbrain
            • cerebrum
            • lobules_of_pineal_cells
            • prebiventral_fissure
            • posterior_part_of_anterior_cochlear_nucleus
            • genu_of_corpus_callosum
            • posterior_part_of_anterior_commissure_of_corona_radiata
            • inferior_medullary_velum
            • mesencephalic_neural_crest
            • infundibular_recess_of_third_ventricle
            • lateral_olfactory_gyrus
            • column_of_fornix_of_third_ventricle_anterior_and_posterior
            • diencephalon
            • amygdalopiriform_transition_area
            • intermediate_layer_of_myelencephalon
            • roof_plate_of_diencephalon
            • pars_alpha_of_gigantocellular_reticular_nucleus
            • taenia_thalami_of_third_ventricle
            • occipitotemporal_sulcus_of_temporal_lobe
            • future_superior_longitudinal_fissure
            • lateral_ventricle
            • ala_of_crista_galli
            • vascular_organ_of_lamina_terminalis_of_diencephalon
            • median_aperture_of_fourth_ventricle
            • paraphysis
            • intermediate_layer_of_future_cerebral_cortex
            • cerebellar_commissure
            • basilar_part_of_pons
            • cerebellum
            • dorsomedial_part_of_supra-optic_nucleus
            • frenulum_veli
            • trigone_of_lateral_lemniscus
            • accessory_medullary_lamina_of_corpus_striatum
            • medial_part_of_medial_parabrachial_nucleus
            • medial_medullary_lamina_of_corpus_striatum
            • fornix_of_telencephalon
            • tectal_plate
            • postcentral_sulcus
            • habenular_trigone
            • lateral_part_of_lateral_parabrachial_nucleus
            • radiate_layer_of_hippocampus
            • parvocellular_part_of_ventral_posteromedial_nucleus_of_thalamus
            • simple_lobule_of_cerebellum_H_VI_and_VI
            • habenula
            • posterior_ramus_of_lateral_cerebral_sulcus
            • medial_part_of_lateral_parabrachial_nucleus
            • future_globus_pallidus_externus
            • medial_part_of_nucleus_accumbens
            • temporal_lobe_of_superolateral_face
            • wing_of_central_lobule_of_cerebellum
            • spinocerebellum
            • mesocortex
            • deep_white_layer_of_superior_colliculus
            • lateral_geniculate_body
            • rhombic_lip
            • future_colliculi_of_tectum_of_midbrain
            • cingulate_gyrus
            • primary_meninx_of_telencephalon
            • precentral_gyrus
            • ventral_striatum
            • hippocampal_commissure
            • fasciolar_gyrus
            • uvula_of_vermis_IX
            • genu_of_internal_capsule
            • vascular_organ_of_lamina_terminalis_of_telencephalon
            • lateral_groove_of_midbrain
            • anterior_perforated_substance
            • posterior_tegmental_decussation
            • archicerebellum
            • interthalamic_adhesion_of_thalamus
            • olfactory_striae
            • reticular_formation_of_pons
            • region_III_of_hippocampus_proper
            • third_ventricle
            • thalamus
            • ventricular_sulci_of_third_ventricle
            • marginal_layer_of_rhombencephalon
            • inferior_precentral_sulcus
            • inferior_temporal_sulcus_of_superolateral_face
            • internal_capsule
            • lamina_of_grey_matter
            • roof_of_fourth_ventricle
            • extreme_capsule
            • lateral_tuberal_nuclei_of_intermediate_hypothalamic_area
            • subarachnoid_space_of_optic_nerve
            • zona_incerta
            • transverse_occipital_suture_variation
            • collateral_trigone
            • globus_pallidus_externus
            • posterior_acoustic_stria
            • anterior_amygdaloid_area
            • magnocellular_part_of_lateral_reticular_nucleus
            • dorsal_ventricular_sulci
            • posterior_part_of_anterior_commissure_of_telencephalon
            • anterior_part_of_anterior_commissure_of_corona_radiata
            • nucleus
              • accessory_cuneate_nucleus
              • amygdaloid_body
              • amygdaloid_nuclei_of_diencephalon
              • amygdaloid_nuclei_of_future_amygdala_of_telencephalon
              • anterior_cochlear_nucleus
              • anterior_gigantocellular_reticular_nucleus
              • anterior_interpositus_nucleus
              • anterior_medial_nucleus_of_midbrain
              • anterior_nuclei_of_thalamus
              • anterior_nucleus_of_pons
              • anterior_paraventricular_nucleus_of_thalamus
              • anterior_part_of_anterior_cochlear_nucleus
              • anterior_part_of_lateral_parabrachial_nucleus
              • anterior_periventricular_nucleus
              • anterior_pulvinar_nucleus
              • anterior_solitary_nucleus
              • anterior_tegmental_nucleus_of_pons
              • anterior_ventrolateral_nucleus_of_thalamus
              • anterodorsal_nucleus_of_thalamus
              • anterolateral_nucleus_of_principal_sensory_nucleus_of_trigeminal_nerve
              • anterolateral_solitary_nucleus
              • anteromedial_nucleus_of_thalamus
              • arcuate_nucleus_of_hypothalamus
              • basal_nuclei_and_related_structures
              • basal_nucleus_of_telencephalon
              • basal_ventral_medial_nucleus_of_thalamus
              • basolateral_amygdaloid_nucleus
              • basomedial_amygdaloid_nucleus
              • bed_nucleus_of_stria_terminalis
              • body_of_caudate_nucleus
              • caerulean_nucleus
              • caudal_nucleus_of_zona_incerta
              • caudal_part_of_spinal_nucleus_of_trigeminal_nerve
              • caudal_part_of_ventral_posterolateral_nucleus
              • caudal_pontine_reticular_nucleus
              • caudate_nucleus
              • central_amygdaloid_nucleus
              • central_lateral_nucleus_of_thalamus
              • central_medial_nucleus_of_thalamus
              • central_nucleus_of_inferior_colliculus
              • central_part_of_cuneate_nucleus
              • central_part_of_gracile_nucleus
              • central_reticular_nucleus
              • centromedian_nucleus_of_thalamus
              • cerebellar_nuclei
              • commissural_nucleus_of_solitary_nuclei
              • cortical_amygdaloid_nucleus
              • cranial_nerve_nuclei
              • cranial_nerve_nuclei_of_mesencephalon
              • cranial_nerve_nuclei_of_rhombencephalon
              • cuneiform_nucleus
              • dorsal_lateral_geniculate_nucleus
              • dorsal_nuclei_of_thalamus
              • dorsal_nucleus_of_hypothalamus
              • dorsal_nucleus_of_medial_geniculate_body
              • dorsal_septal_nucleus
              • dorsal_septal_nucleus_of_amygdaloid_body
              • dorsal_vagal_nucleus
              • dorsomedial_nucleus_of_dorsal_hypothalamus
              • dorsomedial_nucleus_of_intermediate_hypothalamus
              • endopeduncular_nucleus
              • external_nucleus_of_inferior_colliculus
              • fastigial_nucleus
              • gelatinous_solitary_nucleus
              • gelatinous_subnucleus_of_spinal_nucleus_of_trigeminal_nerve
              • gigantocellular_reticular_nucleus
              • inferior_pulvinar_nucleus
              • inferior_vestibular_nucleus
              • intercalated_nucleus
              • interfascicular_nucleus_of_hypoglossal_nerve
              • interfascicular_nucleus_of_tegmentum_of_midbrain
              • intermediate_linear_nucleus
              • intermediate_nucleus_of_lateral_lemniscus
              • intermediate_reticular_nucleus
              • interstitial_amygdaloid_nucleus
              • interstitial_nuclei_of_medial_longitudinal_fasciculus
              • interstitial_parataenial_nucleus
              • interstitial_solitary_nucleus
              • intralaminar_nuclei_of_thalamus
              • lacrimal_nucleus
              • lateral_dorsal_nucleus_of_thalamus
              • lateral_habenular_nucleus
              • lateral_nuclei
              • lateral_nucleus_of_accessory_nuclei_of_optic_tract
              • lateral_nucleus_of_mammillary_body
              • lateral_nucleus_of_pons
              • lateral_nucleus_of_trapezoid_body
              • lateral_parabrachial_nucleus
              • lateral_paragigantocellular_reticular_nucleus
              • lateral_pericuneate_nucleus
              • lateral_posterior_nucleus_of_thalamus
              • lateral_preoptic_nucleus
              • lateral_reticular_nucleus
              • lateral_septal_nucleus
              • lateral_superior_olivary_nucleus
              • lateral_vestibular_nucleus
              • lentiform_nucleus
              • magnus_raphe_nucleus_of_medulla_oblongata
              • magnus_raphe_nucleus_of_pons
              • medial_accessory_olivary_nucleus
              • medial_amygdaloid_nucleus
              • medial_dorsal_nucleus_of_thalamus
              • medial_geniculate_nuclei
              • medial_habenular_nucleus
              • medial_magnocellular_nucleus_of_medial_geniculate_body
              • medial_nuclei
              • medial_nuclei_of_thalamus
              • medial_nucleus_of_accessory_nuclei_of_optic_tract
              • medial_nucleus_of_mammillary_body
              • medial_nucleus_of_medial_dorsal_nucleus_of_thalamus
              • medial_nucleus_of_trapezoid_body
              • medial_parabrachial_nucleus
              • medial_precentral_sulcus
              • medial_preoptic_nucleus
              • medial_pulvinar_nucleus_of_thalamus
              • medial_reticular_nucleus
              • medial_septal_nucleus
              • medial_septal_nucleus_of_amygdaloid_body
              • medial_solitary_nucleus
              • medial_superior_olivary_nucleus
              • medial_ventral_nucleus_of_thalamus
              • medial_vestibular_nucleus_in_medulla_oblongata
              • medial_vestibular_nucleus_in_pontile_tegmentum
              • median_nuclei_of_thalamus
              • median_nucleus_of_pons
              • median_preoptic_nucleus
              • median_raphe_nucleus
              • mesencephalic_nucleus_of_trigeminal_nerve_of_pons
              • motor_nucleus_of_facial_nerve
              • motor_nucleus_of_trigeminal_nerve
              • nuclei_of_inferior_colliculus
              • nuclei_of_lateral_lemniscus
              • nuclei_of_perizonal_fields_of_subthalamus_H_H1_H2
              • nuclei_of_solitary_tract
              • nuclei_of_superior_colliculus
              • nuclei_of_trapezoid_body
              • nucleus_accumbens
              • nucleus_accumbens_primordium
              • nucleus_limitans
              • nucleus_of_abducens_nerve
              • nucleus_of_accessory_nerve
              • nucleus_of_ansa_lenticularis
              • nucleus_of_diagonal_band
              • nucleus_of_dorsal_field_of_subthalamus_H1
              • nucleus_of_hypoglossal_nerve
              • nucleus_of_lateral_olfactory_tract
              • nucleus_of_medial_field_of_subthalamus_H
              • nucleus_of_optic_tract
              • nucleus_of_origin
              • nucleus_of_phrenic_nerve
              • nucleus_of_posterior_commissure
              • nucleus_of_pudendal_nerve
              • nucleus_of_trochlear_nerve
              • nucleus_of_ventral_field_of_subthalamus_H2
              • nucleus_proprius_of_spinal_cord
              • nucleus_pulposus
              • nucleus_reuniens
              • obscurus_raphe_nucleus
              • olivary_pretectal_nucleus
              • oral_pontine_reticular_nucleus
              • pallidal_raphe_nucleus
              • parabrachial_nuclei
              • parabrachial_pigmented_nucleus
              • paracentral_nucleus_of_thalamus
              • paracommissural_solitary_nucleus
              • parafascicular_nucleus_of_thalamus
              • paralaminar_part_of_medial_dorsal_nucleus_of_thalamus
              • paralemniscal_nucleus
              • paramedian_nucleus_of_pons
              • paramedian_reticular_nucleus
              • paranigral_nucleus
              • parapeduncular_nucleus
              • parasolitary_nucleus
              • parataenial_nucleus
              • paraventricular_nuclei_of_thalamus
              • paraventricular_nucleus_of_hypothalamus
              • parvocellular_parataenial_nucleus
              • parvocellular_reticular_nucleus
              • peduncular_nucleus_of_pons
              • pedunculopontine_tegmental_nucleus
              • peri-olivary_nuclei
              • pericentral_nucleus_of_inferior_colliculus
              • perifornical_nucleus
              • periventricular_nucleus_of_hypothalamus
              • periventricular_preoptic_nucleus
              • pontine_raphe_nucleus
              • posterior_accessory_olivary_nucleus
              • posterior_cochlear_nucleus
              • posterior_interpositus_nucleus
              • posterior_nucleus_of_accessory_nuclei_of_optic_tract
              • posterior_nucleus_of_hypothalamus
              • posterior_nucleus_of_lateral_lemniscus
              • posterior_nucleus_of_pons
              • posterior_nucleus_of_thalamus
              • posterior_paragigantocellular_reticular_nucleus
              • posterior_paraventricular_nucleus_of_thalamus
              • posterior_periventricular_nucleus
              • posterior_pretectal_nucleus
              • posterior_raphe_nucleus_of_midbrain
              • posterior_raphe_nucleus_of_pons
              • posterior_solitary_nucleus
              • posterior_tegmental_nucleus
              • posterior_ventrolateral_nucleus_of_thalamus
              • posterolateral_nucleus_of_pons
              • posterolateral_solitary_nucleus
              • posteromedial_nucleus_of_pons
              • posteromedial_nucleus_of_principal_sensory_nucleus_of_trigeminal_nerve
              • precommissural_septal_nucleus
              • prepositus_nucleus
              • pretectal_nuclei
              • principal_sensory_nucleus_of_trigeminal_nerve
              • principal_ventral_medial_nucleus_of_thalamus
              • principial_olivary_nucleus
              • pulvinar_nuclei
              • raphe_nuclei_of_pontile_tegmentum
              • reticular_nuclei_of_pontile_tegmentum
              • reticular_nucleus_of_thalamus
              • reticulotegmental_nucleus_of_basilar_part_of_pons
              • reticulotegmental_nucleus_of_tegmentum_of_pons
              • rhomboid_nucleus
              • septal_nuclei_and_related_structures
              • septofimbrial_nucleus
              • septofimbrial_nucleus_of_amygdaloid_body
              • spinal_nucleus_of_trigeminal_nerve_of_pons
              • subcaerulean_nucleus
              • subcuneiform_nucleus
              • subhypoglossal_nucleus
              • submedial_nucleus_of_thalamus
              • subparabrachial_nucleus
              • subthalamic_nucleus
              • superior_linear_nucleus
              • superior_olivary_nucleus_Barr__Kiernan
              • superior_salivatory_nucleus
              • superior_vestibular_nucleus
              • supra-optic_nucleus
              • suprachiasmatic_nucleus_of_hypothalamus
              • suprageniculate_nucleus
              • supralemniscal_nucleus
              • supramammillary_nucleus
              • terminal_nucleus
              • triangular_nucleus_of_septum
              • triangular_nucleus_of_septum_of_amygdaloid_body
              • tuberomammillary_nucleus
              • ventral_anterior_nucleus_of_thalamus
              • ventral_intermediate_nucleus_of_thalamus
              • ventral_lateral_geniculate_nucleus
              • ventral_nuclei_of_thalamus
              • ventral_posterior_inferior_nucleus_of_thalamus
              • ventral_posterior_internal_nucleus_of_thalamus
              • ventral_posterior_parvocellular_nucleus_of_thalamus
              • ventral_posterolateral_nucleus_of_thalamus
              • ventral_posteromedial_nucleus_of_thalamus
              • ventral_premammillary_nucleus
              • ventral_principal_nucleus_of_medial_geniculate_body
              • ventromedial_nucleus_of_hypothalamus
              • visceral_nuclei
            • superior_temporal_gyrus
            • retrochiasmatic_area
            • ventricular_layer_of_diencephalon
            • occipitotemporal_sulcus_of_occipital_lobe
            • magnocellular_division_of_ventral_anterior_nucleus_of_thalamus
            • alar_plate_of_future_metencephalon
            • central_sulcus_of_medial_and_inferior_surfaces
            • column_of_fornix_of_telenephalon
            • choroid_plexus_of_lateral_ventricle
            • trigeminal_lemniscus_of_thalamus
            • collateral_eminence_of_lateral_ventricle
            • trapezoid_body
            • rhombencephalic_isthmus
            • major_forceps
            • subthalamus
            • future_tentorium_cerebelli
            • dorsal_lamella_of_principal_olivary_nucleus
            • parasubiculum
            • straight_gyrus
            • tectal_plate_of_mesencephalon
            • basilar_sulcus
            • peduncle_of_flocculus
            • radiation_of_corpus_callosum
            • paleodentate_part_of_dentate_nucleus
            • caerulean_nucleus
            • compact_part_of_pedunculopontine_tegmental_nucleus
            • medial_lemniscus_of_pons
            • future_amygdala_of_telencephalon
            • posterolateral_fissure_of_cerebellum
            • tegmental_decussations
            • superior_fovea
            • D2_postoptic
            • external_medullary_lamina_of_thalamus
            • falx_of_cerebrum
            • head_of_caudate_nucleus
            • spinal_lemniscus_of_midbrain
            • inferior_thalamic_radiation
            • cerebellar_falx
            • dorsal_pallidum
            • medial_lemniscus_of_midbrain
            • dorsal_hypothalamic_area
            • stria_medullaris_thalami_of_hypothalamus
            • neuroglia_of_central_nervous_system
            • cortex_corticis
            • lateral_wall_of_future_rhombencephalon
            • pericallosal_cistern
            • medial_forebrain_bundle
            • inferior_colliculus_of_mesencephalon
            • orbital_part_of_inferior_frontal_gyrus
            • medial_occipitotemporal_gyrus_of_temporal_lobe
            • central_thalamic_radiation_of_internal_capsule
            • gracile_tubercle
            • supramarginal_gyrus
            • parvocellular_part_of_lateral_vestibular_nucleus
            • superior_colliculus_of_mesencephalon
            • cave_of_septum_pellucidum
            • middle_cerebellar_peduncle_of_pons
            • marginal_precentral_sulcus_variation
            • plexus_fold
            • central_sulcus_of_superolateral_face
            • subcommissural_organ
            • lateral_wall_of_future_prosencephalon
            • ansa_lenticularis_in_corpus_striatum
            • posterior_ascending_ramus_of_lateral_cerebral_sulcus
            • pallidum
            • posterior_crus_of_fornix
            • rhomboid_fossa
            • hippocampal_sulcus
            • amiculum_of_olive
            • lateral_wall_of_future_diencephalon
            • medullopontine_sulcus
            • marginal_layer_of_mesencephalon
            • future_rhombic_lip
            • basal_forebrain
            • hypothalamus
            • inferior_temporal_gyrus_of_medial_and_inferior_surfaces
            • posterior_part_of_anterior_quadrangular_lobule_of_cerebellum_H_V
            • superior_temporal_sulcus
            • cingulate_sulcus
            • ventral_lamella_of_principal_olivary_nucleus
            • pyramis_of_vermis_VIII
            • parieto-occipital_sulcus_of_occipital_lobe
            • inferolateral_margin_of_cerebral_hemisphere
            • olfactory_sulcus
            • body_of_fornix
            • funiculus
            • obex_of_medulla_oblongata
            • optic_stalk_of_third_ventricle
            • mammillary_area_of_hypothalamus_primordium
            • future_inferior_colliculi
            • ventricular_layer_of_telencephalon
            • tela_choroidea
            • posterior_part_of_culmen_V
            • trigeminal_tubercle
            • decussation
            • nodule_of_vermis_X
            • parietal_lobe_of_medial_and_inferior_surfaces
            • metathalamus
            • medial_olfactory_gyrus
            • aqueduct_of_mesencephalon
            • ventricular_layer_of_cerebellum
            • olfactory_trigone
            • preculminate_fissure
            • taenia_of_fornix
            • intermediate_layer_of_future_myelencephalon
            • internal_medullary_lamina_of_thalamus
            • inferior_temporal_sulcus_of_temporal_lobe
            • posterior_commissure_of_epithalamus
            • gigantocellular_reticular_nucleus
            • sulcus_limitans_of_metencephalon
            • basal_plate_of_myelencephalon
            • medial_geniculate_body
            • lateral_wall_of_telencephalon
            • preoccipital_notch
            • lateral_lamella_of_principal_olivary_nucleus
            • circular_sulcus_of_insula
            • caudolenticular_grey_bridges
            • lateral_lemniscus_of_thalamus
            • ventral_lateral_complex_of_thalamus
            • future_epithelial_lamina
            • olfactory_islets
            • frontal_lobe_of_superolateral_face
            • median_sulcus_of_fourth_ventricle
            • corpus_callosum
            • caudal_nucleus_of_zona_incerta
            • infundibular_recess_of_third_ventricle_of_pituitary_gland
            • ventral_part_of_central_reticular_nucleus
            • gracile_fasciculus_of_medullary_white_matter
            • cerebro-cerebellar_fissure
            • posteromedial_part_of_red_nucleus
            • cistern
            • tuber_of_vermis_VII_B
            • anterior_radiation_of_thalamus
            • mammillary_body
            • roof_plate_of_mesencephalon
            • dentate_gyrus_of_limbic_lobe
            • dentate_gyrus_of_hippocampus
            • subfornical_organ_of_diencephalon
            • superior_margin_of_cerebral_hemisphere
            • limen_insulae
            • otic_ganglion_primordium
            • oral_part_of_ventral_posterolateral_nucleus
            • future_colliculi_of_roof_plate_of_midbrain
            • habenular_sulcus
            • superficial_grey_layer_of_superior_colliculus
            • frontal_lobe_of_medial_and_inferior_surfaces
            • reticular_formation_of_midbrain
            • preoptic_area
            • parietal_lobe_of_superolateral_face
            • interlobar_sulci_of_medial_and_inferior_surfaces
            • future_olfactory_area
            • hilum_of_dentate_nucleus
            • lenticulothalamic_part_of_internal_capsule
            • interlobar_sulci_of_superolateral_face
            • central_tegmental_tract_of_midbrain
            • foramen_caecum_of_medulla_oblongata
            • choroidal_fissure_of_lateral_ventricle
            • subiculum_of_hippocampus
            • lateral_part_of_substantia_nigra
            • alveus_of_hippocampus
            • middle_cerebellar_peduncle
            • pontocerebellar_cistern
            • external_capsule
            • intrabiventral_fissure
            • future_hypothalamus
            • sphenoidal_emissary_foramen_variation
            • superior_medullary_velum
            • diencephalic_part_of_interventricular_foramen
            • tegmentum_of_pons
            • pre-olivary_groove
            • marginal_layer_of_future_myelencephalon
            • fissure_of_hypophysis
            • intermediate_layer_of_neural_tube
            • inferior_part_of_wing_of_central_lobule_of_cerebellum_H_II
            • oral_subnucleus_of_spinal_nucleus_of_trigeminal_nerve
            • dorsal_part_of_central_reticular_nucleus
            • lateral_hypothalamic_area
            • choroid_membrane_of_third_ventricle_of_hypothalamus
            • paraolfactory_sulci
            • intermediate_layer_of_diencephalon
            • layers_of_isocortex
            • frontal_horn_of_lateral_ventricle
            • short_gyri_of_insula
            • optic_radiation_of_sublentiform_limb
            • intermediate_layer_of_primordium_of_cerebellum
            • middle_frontal_gyrus
            • restiform_body_of_white_medullary_substance
            • sulcus_of_corpus_callosum
            • superior_frontal_sulcus
            • tonsil_of_cerebellum_H_IX
            • superior_semilunar_lobule_of_cerebellum_H_VII_A
            • pineal_recess
            • hippocampus_primordium
            • telencephalon
            • cerebellar_tentorium
            • floor_plate_of_diencephalon
            • superior_cerebellar_peduncle_of_midbrain_tegmentum
            • anterior_tegmental_decussation
            • anterior_paracentral_gyrus
            • medial_part_of_biventral_lobule_H_VIII_B
            • future_cerebral_cortex
            • marginal_layer_of_future_cerebral_cortex
            • lateral_funiculus_of_medulla
            • anterior_thalamic_radiation_of_anterior_limb
            • anterolateral_sulcus_of_medulla
            • interstitial_subdivision_of_nucleus_of_posterior_commissure
            • marginal_layer_of_myelencephalon
            • dorsal_thalamus_primordium
            • cerebral_peduncle
            • orbital_gyri
            • posterior_transverse_temporal_gyrus
            • anterior_thalamic_tubercle
            • internal_granular_layer_of_isocortex
            • juxtarestiform_body_of_cerebellum
            • paleocerebellum
            • future_pars_tuberalis_of_adenohypophysis_primordium
            • hypoglossal_trigone
            • future_cerebral_hemispheres
            • pons
            • uncus
            • intercrural_fissure_of_cerebellum
            • meninx_of_diencephalon
            • parieto-occipital_sulcus_of_medial_and_inferior_surfaces
            • inferior_semilunar_lobule_of_cerebellum_H_VII_A
            • intermediate_grey_layer_of_superior_colliculus
            • pulvinar
            • retrolentiform_limb
            • brachium_of_superior_colliculus
            • transverse_temporal_sulcus
            • lateral_pulvinar_nucleus_of_thalamus
            • lamina_of_septum_pellucidum
            • brachium_of_inferior_colliculus
            • striatum
            • alar_plate_of_future_myelencephalon
            • lateral_wall_of_rhombencephalon
            • ventral_medial_complex_of_thalamus
            • ambient_cistern
            • cuneate_tubercle
            • folia_of_cerebellum
            • triangular_part_of_inferior_frontal_gyrus
            • cranial_root_of_accessory_nerve
            • magnocellular_part_of_red_nucleus
            • inferior_cerebellar_peduncle_of_white_medullary_substance
            • future_rhombencephalon
            • arbor_vitae
            • anterior_median_fissure_of_medulla_oblongata
            • posterior_part_of_central_lobule_of_cerebellum_III
            • splenium_of_corpus_callosum
            • chiasmatic_plate_of_diencephalon
            • pyramid_of_medulla
            • future_thalamus
            • median_eminence_of_neurohypophysis
            • sulcus_limitans_of_mesencephalon
            • posterior_superior_fissure_of_cerebellum
            • marginal_branch_of_cingulate_sulcus
            • anterior_lobe_of_cerebellum
            • occipital_stripe_of_internal_granular_layer_of_isocortex
            • septal_nuclei_of_future_septum_of_telencephalon
            • subtrigeminal_part_of_lateral_reticular_nucleus
            • compact_part_of_substantia_nigra
            • future_dentate_area
            • dural_limiting_layer_of_primary_meninx_of_diencephalon
            • temporal_horn_of_lateral_ventricle
            • innominate_substance
            • superior_frontal_gyrus
            • future_mammillary_area
            • cingulum
            • lateral_recess_of_fourth_ventricle
            • epiphysis
            • retinohypothalamic_tract
            • superior_cerebellar_peduncle_of_thalamus
            • ventral_pallidum
            • fimbriodentate_sulcus
            • olfactory_bulb
            • paracentral_lobule_of_frontal_lobe
            • floor_plate_of_D2
            • trigeminal_lemniscus_of_pons
            • grey_matter
            • marginal_layer_of_primordium_of_cerebellum
            • raphe_of_pons
            • pars_intermedia_of_adenohypophysis
            • ventromedial_part_of_supra-optic_nucleus
            • central_sulcus_of_frontal_lobe
            • intermediate_layer_of_metencephalon
            • telo-diencephalic_fissure
            • opening_of_aqueduct_of_midbrain
            • hippocampal_digitations
            • tela_choroidea_of_third_ventricle
            • floor_plate_of_D1
            • zonal_layer_of_superior_colliculus
            • principal_division_of_ventral_anterior_nucleus_of_thalamus
            • flocculonodular_lobe
            • body_of_cerebellum
            • adenohypophysis_primordium
            • future_hypothalamic_area
            • olfactory_tubercle
            • neocerebellum
            • lunate_sulcus
            • lateral_lemniscus_of_pons
            • lateral_part_of_medial_mammillary_nucleus
            • hypothalamus_primordium
            • fimbria_of_hippocampus_of_limbic_lobe
            • layers_of_dentate_gyrus
            • superior_cerebellar_peduncle_of_pons
            • koniocellular_layer_of_dorsal_nucleus_of_lateral_geniculate_body
            • cerebellopontine_angle
            • anterior_surface_of_petrous_part_of_temporal_bone
            • choroid_membrane_of_fourth_ventricle
            • olfactory_ventricle
            • subfornical_organ_of_telencephalon
            • anterior_part_of_central_lobule_of_cerebellum_II
            • molecular_layer_of_isocortex
            • intraparietal_sulcus
            • amygdaloid_area_of_diencephalon
            • inferior_frontal_sulcus
            • tuber_cinerum
            • dura_mater_of_brain
            • stria_of_internal_pyramidal_layer_of_isocortex
            • pes_hippocampi
            • retro-olivary_groove
            • primary_fissure_of_cerebellum
            • basal_plate_of_metencephalon
            • metencephalon
            • culmen_IV_and_V
            • fascicle
            • subparietal_sulcus_of_parietal_lobe
            • granular_layer_of_dentate_gyrus
            • choroid_plexus_of_third_ventricle
            • trunk_of_corpus_callosum
            • columna_of_grey_matter
            • corona_radiata
            • sulcus_limitans_of_myelencephalon
            • future_subthalamus
            • rostrodorsal_subnucleus_of_gracile_nucleus
            • inferomedial_margin_of_cerebral_hemisphere
            • future_pars_anterior_of_adenohypophysis_primordium
            • calcarine_sulcus
            • folium_of_vermis_VII_A
            • temporal_lobe_of_medial_and_inferior_surfaces
            • stria_of_external_granular_layer_of_isocortex
            • future_olfactory_tubercle
            • pachymeninx_of_telencephalon
            • future_body_of_cerebellum
            • lateral_septal_nucleus_of_amygdaloid_body
            • intermediate_precentral_sulcus_variation
            • lingual_gyrus
            • minor_forceps
            • lateral_tuberal_nuclei_of_lateral_hypothalamic_area
            • floor_plate_of_mesencephalon
            • cerebellar_peduncles
            • transverse_occipital_sulcus
            • opening_of_aqueduct_of_midbrain_of_third_ventricle
            • habenulo-interpeduncular_tract
            • hilum_of_inferior_olivary_nucleus
            • white_matter
            • arachnoid_granulations
            • dorsal_striatum
            • lamina_terminalis_of_third_ventricle
            • orbital_sulci
            • lateral_zone_of_hypothalamus
            • central_thalamic_radiation
            • paracentral_lobule_of_parietal_lobe
            • intermediate_layer_of_mesencephalon
            • habenular_commissure
            • tegmentum_of_mesencephalon
            • frenulum_of_superior_medullary_velum_of_midbrain
            • region_I_of_hippocampus_proper
            • anterior_commissure_of_corona_radiata
            • posterior_median_sulcus_of_medulla
            • pyramidal_tract_of_medulla_oblongata
            • marginal_layer_of_future_rhombencephalon
            • rhombencephalon
            • external_pyramidal_layer_of_isocortex
            • magnocellular_subnucleus_spinal_nucleus_of_trigeminal_nerve
            • optic_radiation_of_thalamus
            • amiculum_of_dentate_nucleus
            • isocortex
            • future_myelencephalon
            • acoustic_radiation_of_internal_capsule
            • fastigium
            • lacunar-molecular_layer_of_hippocampus
            • cerebral_gyri
            • future_falx_cerebri
            • lateral_aperture_of_fourth_ventricle
            • lateral_wall_of_future_mesencephalon
            • posterior_commissure_of_diencephalon
            • tail_of_caudate_nucleus
            • hippocampus_proper
            • deep_grey_layer_of_superior_colliculus
            • peduncular_loop_of_telencephalon
            • occipital_lobe_of_superolateral_face
            • cerebral_crus
            • fibre
            • paraterminal_gyrus
            • inferior_temporal_gyrus_of_superolateral_face
            • inferior_parietal_lobule
            • vallecula_of_cerebellum
            • ventral_striatum_of_amygdaloid_body
            • multiform_layer_of_dentate_gyrus
            • ansa_peduncularis_of_thalamus
            • roof_plate_of_telencephalon
            • occipital_horn_of_lateral_ventricle
            • floor_plate_of_telencephalon
            • medullary_stria_of_fourth_ventricle_of_grey_substance
            • intermediate_acoustic_stria
            • parvocellular_layers_of_dorsal_nucleus_of_lateral_geniculate_body
            • amygdalohippocampal_area
            • putamen
            • gracile_lobule_H_VII_B
            • area_postrema_of_pons
            • posterior_lobe_of_cerebellum
            • lateral_orbital_gyrus
            • stria_of_molecular_layer_of_isocortex
            • cuneus
            • choroid_plexus_of_telencephalon
            • chiasmatic_cistern
            • stria_medullaris_of_thalamus
            • future_corpus_striatum
            • juxtarestiform_body_of_white_medullary_substance
            • optic_layer_of_superior_colliculus
            • posterior_quadrangular_lobule_of_cerebellum_H_VI
            • gracile_fasciculus_of_medulla_oblongata
            • cerebral_hemispheres_right_and_left
            • superior_cerebellar_peduncle
            • future_prosencephalon
            • cerebral_sulci
            • stria_terminalis
            • molecular_layer_of_cerebellar_cortex
            • zonal_subnucleus_of_spinal_nucleus_of_trigeminal_nerve
            • choroid_line_of_lateral_ventricle
            • ventral_pallidum_of_amygdaloid_body
            • crus_of_fornix
            • posterior_perforated_substance
            • claustrum
            • parieto-occipital_sulcus_of_superolateral_face
            • indusium_griseum
            • dorsal_subdivision_of_nucleus_of_posterior_commissure
            • medial_eminence_of_floor_of_fourth_ventricle
            • region_II_of_hippocampus_proper
            • parahippocampal_gyrus
            • future_flocculus
            • vestibulocerebellum
            • neurohypophysis
            • temporal_operculum
            • cerebral_surface_of_temporal_bone
            • ventrobasal_complex
            • precentral_fissure_of_cerebellum
            • collateral_sulcus_of_limbic_lobe
            • medial_stria
            • subparietal_sulcus
            • collateral_sulcus_of_temporal_lobe
            • sulcus_limitans
            • subdural_space_inconstant_pathological
            • mesencephalon
            • obex_of_fourth_ventricle
            • epithalamus_primordium
            • acoustic_radiation_of_thalamus
            • grey_line
            • inferior_cerebellar_peduncle_of_medulla
            • posterior_thalamic_radiation_of_internal_capsule
            • arachnoid_trabeculae
            • ventricular_layer_of_mesencephalon
            • inferior_cerebellar_peduncle
            • anterior_transverse_temporal_gyrus
            • intermediate_layer_of_future_metencephalon
            • lamina_terminalis_of_medial_and_inferior_surfaces
            • frenulum_of_superior_medullary_vellum_of_pons
            • hypophysial_stalk
            • corticothalamic_fibres_of_sublentiform_limb
            • corpus_striatum
            • opercular_part_of_inferior_frontal_gyrus
            • superior_precentral_sulcus
            • marginal_layer_of_future_metencephalon
            • posterior_nuclear_complex_of_thalamus
            • superior_part_of_wing_of_central_lobule_of_cerebellum_H_III
            • telencephalic_part_of_third_ventricle
            • marginal_layer_of_diencephalon
            • subfornical_organ_of_amygdaloid_body
            • transverse_cerebral_fissure
            • commissural_plate
            • horizontal_limb_of_diagonal_band
            • posterior_cerebellar_commissure
            • quadrigeminal_cistern
            • future_septum_of_telencephalon
            • restiform_body_of_cerebellum
            • anterior_cerebellar_commissure
            • spinal_lemniscus_of_pons
            • lateral_part_of_nucleus_accumbens
            • optic_radiation_of_retrolentiform_limb
            • medial_ventricular_eminence_of_telencephalon
            • subcallosal_area
            • trigeminal_lemniscus_of_midbrain
            • multiform_layer_of_isocortex
            • capsule_of_medial_geniculate_body
            • dorsolateral_part_of_supra-optic_nucleus
            • medial_part_of_medial_mammillary_nucleus
            • intermediate_hypothalamic_area
            • choroid_enlargement_of_lateral_ventricle
            • base_of_peduncle
            • magnocellular_layers_of_dorsal_nucleus_of_lateral_geniculate_body
            • anterior_limb_of_internal_capsule
            • telencephalon_medium
            • marginal_layer_of_telencephalon_medium
            • neodentate_part_of_dentate_nucleus
            • sulcus_limitans_of_diencephalon
            • retro-olivary_area
            • vagal_trigone
            • lateral_raphespinal_tract_of_medulla
            • future_lateral_ventricle
            • cerebral_surface_of_sphenoid
            • retrorubral_part_of_substantia_nigra
            • taenia_thalami
            • spinal_lemniscus_of_medulla
            • intraculminate_fissure
            • medial_frontal_gyrus
            • dissipated_part_of_pedunculopontine_tegmental_nucleus
            • granular_layer_of_cerebellar_cortex
            • fornix_of_hypothalamus
            • future_pars_intermedia_of_adenohypophysis_primordium
            • future_pons
            • marginal_layer_of_telencephalon
            • posterolateral_sulcus_of_medulla_oblongata
            • roof_plate_of_rhombencephalon
            • temporal_pole
            • transverse_temporal_gyri
            • ventricular_layer_of_metencephalon
            • tract
            • frontal_operculum
            • layers_of_hippocampus
            • insular_gyri
            • medial_orbital_gyrus
            • globus_pallidus_lateral_segment
            • bulb_of_occipital_horn_of_lateral_ventricle
            • fibrous_capsule_of_hypophysis
            • paraolfactory_area
            • ventricular_layer_of_telencephalon_medium
            • hippocampus
            • future_mesencephalon
            • lateral_part_of_medial_parabrachial_nucleus
            • medial_lemniscus_of_medulla
            • anterior_ascending_ramus_of_lateral_cerebral_sulcus
            • basal_plate_of_future_myelencephalon
            • intergeniculate_leaf
            • superior_medullary_velum_of_fourth_ventricle
            • interventricular_foramen_of_lateral_ventricle
            • lateral_medullary_lamina_of_corpus_striatum
            • future_cerebral_peduncles
            • intermediate_layer_of_cerebellum
            • insula
            • superior_parietal_lobule
            • septal_area
            • flocculus_H_X
            • suprapineal_recess
            • declive_VI
            • lateral_wall_of_mesencephalon
            • middle_temporal_gyrus
            • fourth_ventricle
            • rhinal_sulcus
            • septum_pellucidum
            • secretory_follicles_of_hypophysis
            • vertical_limb_of_diagonal_band
            • brain_stem
            • posterior_column_of_fornix_of_telencephalon
            • central_tegmental_tract_of_pons
            • interpeduncular_cistern
            • subarachnoid_space_of_brain
            • basal_plate_of_future_metencephalon
            • cingulate_sulcus_of_limbic_lobe
            • anterior_ramus_of_lateral_cerebral_sulcus
            • lateral_occipitotemporal_gyrus_of_occipital_lobe
            • principal_part_of_ventral_posteromedial_nucleus
            • angular_gyrus
            • limbic_lobe
            • medial_longitudinal_stria
            • mesencephalic_vesicle_cerebral_aqueduct
            • lateral_sulcus
            • paracentral_sulcus
            • posterior_part_of_lateral_parabrachial_nucleus
            • secondary_fissure_of_cerebellum
            • rostrum_of_corpus_callosum
            • ventral_subdivision_of_nucleus_of_posterior_commissure
            • cortical_amygdaloid_nucleus
            • superolateral_face_of_cerebral_hemisphere
            • posterior_paracentral_gyrus
            • lateral_wall_of_diencephalon
            • trigeminal_cave
            • neural_lobe_of_pituitary_gland
            • supra-optic_recess
            • medial_sulcus
            • preoccipital_notch_of_occipital_lobe
            • archicortex
            • periventricular_zone_of_hypothalamus
            • basal_substance_of_telencephalon
            • tapetum
            • branches_to_internal_capsule_retrolentiform_limb
            • superior_colliculus
            • cerebral_cortex_of_cerebral_hemisphere
            • anterior_column_of_fornix_of_telencephalon
            • future_epiphysis
            • collateral_sulcus_of_medial_and_inferior_surfaces
            • central_sulcus_of_insula
            • medial_lemniscus_of_thalamus
            • anterior_commissure_of_telencephalon
            • cerebellar_fissures
            • ansa_lenticularis_in_thalamus
            • hemisphere_of_cerebellum_H_II_-_H_X
            • sinusoid_capillary_of_adenohypophysis
            • central_part_of_lateral_ventricle
            • medial_ventricular_eminence_of_diencephalon
            • cerebral_lobes
            • lateral_occipitotemporal_gyrus_of_temporal_lobe
            • anterior_part_of_anterior_commissure_of_telencephalon
            • reticular_part_of_substantia_nigra
            • habenular_commissure_of_hypothalamus
            • system_of_liquor_cerebrospinalis
            • cerebral_cortex
            • oculomotor_sulcus
            • posterior_cerbellomedullary_cistern
            • alar_plate_of_metencephalon
            • presubiculum
            • substantia_nigra
            • cerebellar_cortex
            • postcentral_gyrus
            • pyramidal_layer_of_hippocampus
            • paraolfactory_gyri
            • myelencephalon
            • middle_clinoid_process_variation
            • horizontal_parietal_suture_variation
            • external_granular_layer_of_isocortex
            • stria_of_internal_granular_layer_of_isocortex
            • sublenticular_extended_amygdala
            • spinal_lemniscus_of_thalamus
            • calcarine_spur
            • posterior_hypothalamic_area
            • interventricular_foramen_of_third_ventricle
            • lemniscus
            • magnocellular_part_of_inferior_vestibular_nucleus
            • lateral_stria
            • semilunar_lobules_of_cerebellum_H_VII_A
            • medial_occipitotemporal_gyrus_of_occipital_lobe
            • inferior_frontal_gyrus
            • periamygdaloid_cortex
            • auditory_commissure_of_pons
            • intermediate_white_layer_of_superior_colliculus
            • occipital_lobe_of_medial_and_inferior_surfaces
            • lateral_part_of_biventral_lobule_H_VIII_A
            • lateral_ventricular_eminence_of_future_corpus_striatum
            • lateral_longitudinal_stria
          • part_of_digestive_organ
          • part_of_endocrin_organ
          • part_of_gland
          • part_of_heart
          • part_of_integument_organ
          • part_of_larynx
          • part_of_lymphatic_organ
          • part_of_pharynx
          • part_of_respiratory_organ
          • part_of_sensory_organ
          • part_of_sexual_organ
          • part_of_spinal_cord
          • part_of_urine_organ
        • gland
        • part_of_tendon
        • part_of_tooth_and_part_of_parodontium
    • anatomical_abstract_concept
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Details

Name:

suprachiasmatic nucleus of hypothalamus

Alternative name: -

Medical name: Nucleus suprachiasmaticus hypothalami

Definition: -

Present in stage: -

Relations:
hasCell:glial_cell_of_central_nervous_system
 glioblast
 astrocyte
isPartOf:anterior_hypothalamic_area
receives:retinohypothalamic_tract